I ran a few test affiliate transactions using coupons. I ran a few tests and then closed the earnings for the affiliate, and then I ran a few more test transactions.
The totals listed on the manage affiliates page are correct… Closed: 125.92 and Pending: 17.81. The problem occurs when I go to totals. The total listed for payout is 143.73, and when I generate the paypal mass payment file I get the same payout number 143.73… which is the combined total, it should be 17.81.
I am running it on woocommerce.